Insertion junction: CLIP2.000161_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000161
Chromosome:chromosome 10
Location:851164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423500 HMO1,HMOX1 Heme oxygenase; (1 of 1) PTHR35703//PTHR35703:SF2 - FAMILY NOT NAMED // HEME OXYGENASE 4, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGCTATCACCGAGGCATAAAGCAAGAGGCGGTAGCAGCAGCCTCTC
Internal bar code:CATTACGTAAGCTTCCGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1099
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAATCAGGCGCACAACAC
Suggested primer 2:ACGTGGCCTTTCTGGAGAAG