Insertion junction: CLIP2.000161_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000161
Chromosome:chromosome 10
Location:851167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423500 HMO1,HMOX1 Heme oxygenase; (1 of 1) PTHR35703//PTHR35703:SF2 - FAMILY NOT NAMED // HEME OXYGENASE 4, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGCCGCTGTACTTGAAGCTGGACTCGGTCTCCGCCAGGCAGTGCTCC
Internal bar code:GACGTAATGGAACGTTCTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3530
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGGCCTTTCTGGAGAAG
Suggested primer 2:ACAAATCAGGCGCACAACAC