Insertion junction: CLIP2.000163_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000163
Chromosome:chromosome 3
Location:8357992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199000 PHOT,PHT1,PHOT1 (1 of 1) PTHR24351//PTHR24351:SF76 - RIBOSOMAL PROTEIN S6 KINASE // PROTEIN TWIN LOV 1; Phototropin 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCCTCACGTCCCTGGGTTTTGAGCACTGAGCAGCACGGTGGAAAGCG
Internal bar code:TACTCGCATTCTGGTGAAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1999
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCCACGTTCCAAAGCTAC
Suggested primer 2:GGTGCTTTGCCTTACAAGCC