Insertion junction: CLIP2.000165_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000165
Chromosome:chromosome 6
Location:2914655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273050 CGLD10 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR35279//PTHR35279:SF1 - FAMILY NOT NAMED // ARABINANASE/LEVANSUCRASE/INVERTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACCCGAGCCGCTGGTCTGTCGGCCGGTGTAGTACAGCCGCCACCTCC
Internal bar code:AGGCGGAACTAATGCGCACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2840
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTGTCTCCATCCGCTT
Suggested primer 2:CAAGTTGGTCGCCAGTTTGG