Insertion junction: CLIP2.000169_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000169
Chromosome:chromosome 3
Location:683636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145767 RRP6,RRP6a putative exosome subunit; (1 of 1) K12951 - cation-transporting P-type ATPase D (ctpD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAAACTCGCACGTTAAAAGTACGCCAGTGCGCTGTGGAGGAGCACAT
Internal bar code:AGATACTTTATACTTCAGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1259
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTTCTCCGTTTACGCAG
Suggested primer 2:CCCCCAAAGAGACAGTGCTT