Insertion junction: CLIP2.000174_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000174
Chromosome:chromosome 8
Location:3902319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381950 YAK1,TAR1 (1 of 1) K18670 - dual specificity protein kinase YAK1 [EC:2.7.12.1] (YAK1); DYRK-type protein kinase/Yet-another-kinase 1 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCACATGCAGACCACAAACGGGCACGTGGAGCTTGGCACGGCACAAA
Internal bar code:CCGGTGTTGTCCGAGTTCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2345
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATGCCGGGCACATATTG
Suggested primer 2:GGCTGTTGAAGTTTGAGCCG