Insertion junction: CLIP2.000177_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000177
Chromosome:chromosome 5
Location:141202
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242350 Putative calcium-transporting ATPase, endoplasmic reticulum-type; (1 of 1) PTHR24093:SF289 - CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATCGCAGTTGCGGTAGCAGCACCGCTCACCGCGGGGGCCACCACCTG
Internal bar code:CCATACCTTTAATCGGGGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1689
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGAGGTATGGAGAGGGG
Suggested primer 2:AGTGGGTTGCATGGGATGAG