Insertion junction: CLIP2.000178_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000178
Chromosome:chromosome 15
Location:965123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCTGAAGCCGTGCTTTCGCGCCGCGCTGAGCTGTCATTATGGGCTGG
Internal bar code:AATACACGCGCCCCATCTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1956
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGTTGTAAGTTGTTGCA
Suggested primer 2:GCCAGCGATATGAGAGCAGT