Insertion junction: CLIP2.000183_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000183
Chromosome:chromosome 7
Location:515670
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g316050 CDJ2 Chloroplast DnaJ-like protein 2; (1 of 4) K03686 - molecular chaperone DnaJ (dnaJ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTGGGGATGCGTGGAAACAGGCCCCCACCAACCCAACCTAACCCGCC
Internal bar code:TGATTGTTGGTAGGTTATCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:580
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAACAGCAACATCGGGC
Suggested primer 2:AACTGAAGGCTCTCCACAGC