Insertion junction: CLIP2.000185_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000185
Chromosome:chromosome 17
Location:3220505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721500 GBSS1A,STA2,GBBSI,GBS1 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein; Granule-bound starch synthase IA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCGCCGCCAATCGACACGTGCACCCTCAGCCCCACGCCCTGCTAGCG
Internal bar code:GATGTTTCACCGCGGTCAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1572
LEAP-Seq percent confirming:98.8095
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTTGGGCCCTGATAGCA
Suggested primer 2:GTGGTAAAAGAGGAGGGGCC