Insertion junction: CLIP2.000200_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000200
Chromosome:chromosome 13
Location:921353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567950 STA1,AGP1 ADP-glucose pyrophosphorylase large subunit; (1 of 1) PTHR22572:SF119 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCGGTGCTGTGGAGCCAGAAGAGATGAAGAGGCGCCGGGTGCGGCAG
Internal bar code:GTTTTAAATGGCGGACCGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4645
LEAP-Seq percent confirming:96.1905
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATCTGTCCTTCTGCGTG
Suggested primer 2:GTCGAGTTGAACTGCAGGGA