Insertion junction: CLIP2.000201_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000201
Chromosome:chromosome 3
Location:2806744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161800 MDN1 (1 of 1) K14572 - midasin (MDN1, REA1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGAGCATATGCACGGGCTGAGCATGTACGGACTTGCTGTCCCCGAGC
Internal bar code:AGGATTGATCAGAAACGAGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:981
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGCGTTCACGACTTATG
Suggested primer 2:GTGTCATGGTTGAGGCTCCA