Insertion junction: CLIP2.000205_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000205
Chromosome:chromosome 6
Location:2474232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269050 TIC62,YCF39-2 (1 of 2) PTHR14194:SF71 - PRESTALK A DIFFERENTIATION PROTEIN A; Putative dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAATGTGCGTCCATGCGACTCCTAGGTTACATGATGCCGAGTTGACGC
Internal bar code:TATTATGATTAAGGAGTAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGTGCACGAAACACAT
Suggested primer 2:GCTGTGCTGTGAAGGACTCT