Insertion junction: CLIP2.000208_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000208
Chromosome:chromosome 12
Location:5667400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531900 FLVA,FLVA1 (1 of 2) 1.5.3.22 - Coenzyme F420H(2) oxidase; Thylakoid flavodiiron protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAAAAGTGAAGGCGTAGCCAGAAACAGTAGTACAGGAGACGCGTTGT
Internal bar code:CAAAGCGCCAGTTATCAGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2950
LEAP-Seq percent confirming:71.6667
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGCGGACAGTAGGATCA
Suggested primer 2:CCGCCTGCAATTGCTACATC