Insertion junction: CLIP2.000224_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000224
Chromosome:chromosome 10
Location:3887280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446350 CGLD14 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR31407//PTHR31407:SF17 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTAGGAGTGCAACCGGCAGGCACCGGTGTTTGAGTGTAGGGCAGCGA
Internal bar code:GCGTGATATGGAGGGAGATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2068
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTCGGTTGTAGCTGTGG
Suggested primer 2:ACGCTGAAGATTCCTGCCAA