Insertion junction: CLIP2.000225_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000225
Chromosome:chromosome 13
Location:5260777
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g607900 CPLD68 Conserved in the Plant Lineage and Diatoms; (1 of 96) IPR019734 - Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCCGCACTGCAGCTTCATGAAGGCGGACAAGTTCTCATACGCGGTC
Internal bar code:GCGCGGTAGCAGCCGCAATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGGCGATGACCTAGGCT
Suggested primer 2:ATGGAGTAGCCCAGGTACGT