Insertion junction: CLIP2.000227_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000227
Chromosome:chromosome 16
Location:1059619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649433 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTTGCCGGGTACACAGCTCGTGCGGGGCGATTGCCTGGTCTGGCAAA
Internal bar code:AATTGGCAATTTTGATCTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3805
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGCCGACAAGAGTTCA
Suggested primer 2:GGTGGGATGGTGAGATAGCG