Insertion junction: CLIP2.000233_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000233
Chromosome:chromosome 3
Location:8373583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198850 TL19 (1 of 3) PTHR31407//PTHR31407:SF18 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC; Thylakoid llumen protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTAGCAGGTGGTCTTCACGACTTCTATGACCGATGTTGGAAACTGAGT
Internal bar code:GCGGCGTGCGAAAGAAATTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1044
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGTTTGTGTGGCATCCC
Suggested primer 2:CTCCACCACCCACCACTTAC