Insertion junction: CLIP2.000236_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000236
Chromosome:chromosome 9
Location:6504105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g415550 OPR43,ASA2 Mitochondrial F1F0 ATP synthase associated protein 2 3'UTR_intron
Cre09.g415600 (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGGCTCCTATCTTAATGTCTCCAGACATTAATTGGCCATTTTGGCCG
Internal bar code:TGCCGAGGTTTCGATAGAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3204
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGGTTGGACAGATGCGT
Suggested primer 2:AGCTCAGGATCTCACCCCAT