Insertion junction: CLIP2.000238_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000238
Chromosome:chromosome 2
Location:2742378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093850 (1 of 1) IPR000104//IPR000595//IPR001611//IPR003591//IPR018490 - Antifreeze protein, type I // Cyclic nucleotide-binding domain // Leucine-rich repeat // Leucine-rich repeat, typical subtype // Cyclic nucleotide-binding-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAAGCTGCGACCGCCGGTCAAGTACAGCTGCTAGTGCTGTTAGCAGCC
Internal bar code:TCCGAAACAGTAATTTTGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4042
LEAP-Seq percent confirming:99.1228
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCGTGTTGCATTGCTTG
Suggested primer 2:AACACCACACTGAACAGGCA