Insertion junction: CLIP2.000239_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000239
Chromosome:chromosome 7
Location:5541629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351650 BUG22,FAP20 Transcription Factor 2-Like Flagellar Associated Protein 20; (1 of 3) PF05018 - Protein of unknown function (DUF667) (DUF667) outside_mRNA
Cre07.g351700 (1 of 1) PTHR19315:SF9 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCATGAACCATTTACGCATTTCAGCAACCATGTGTAAAAGCATCTTT
Internal bar code:AGAAACACGTTCTTGGATTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3578
LEAP-Seq percent confirming:99.0741
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGACGCGAACGCCTATAT
Suggested primer 2:CACGTCGCTCATCAATGCTG