Insertion junction: CLIP2.000239_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000239
Chromosome:chromosome 7
Location:5541629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351650 BUG22,FAP20 Transcription Factor 2-Like Flagellar Associated Protein 20; (1 of 3) PF05018 - Protein of unknown function (DUF667) (DUF667) outside_mRNA
Cre07.g351700 (1 of 1) PTHR19315:SF9 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCTCAGGGCCGCACTCACCCTCTGGGCGTGCCCTTAGGCCGAGGGG
Internal bar code:GTGGATTACTGAGCGAGGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3380
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTCGCTCATCAATGCTG
Suggested primer 2:CTGGACGCGAACGCCTATAT