Insertion junction: CLIP2.000241_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000241
Chromosome:chromosome 7
Location:6139368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGCCTCGGGCGACTCCCAGAGCCCTCCGAGCGTGCGGGTTTGGCTTG
Internal bar code:GTGTCCTTAGTCACGACGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2916
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCTCGTATCTTCCTTCG
Suggested primer 2:CATATGCCACGCAGGTTTCG