Insertion junction: CLIP2.000244_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000244
Chromosome:chromosome 2
Location:6193998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g120250 CDPK7,STT7 (1 of 3) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC; Chloroplast protein kinase required for state transitions intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATGTAACCCCCCTCTCCTCCCCCCTCTCCTCCTTCTTCACCTCCTCC
Internal bar code:GATGAATGTTCAGTGCTCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:59
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGTCTGAGGCGTGATAG
Suggested primer 2:GCGACCAATCCGAGACCTAG