Insertion junction: CLIP2.000244_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000244
Chromosome:chromosome 2
Location:6193999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g120250 CDPK7,STT7 (1 of 3) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC; Chloroplast protein kinase required for state transitions intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATTAATTAAGAAGCGAAGTCGTAGGAGAGGGGGGAGGAGAGGGGGGA
Internal bar code:GAACGGTAGCTCACGTTTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:233
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACCAATCCGAGACCTAG
Suggested primer 2:GGGTGTCTGAGGCGTGATAG