Insertion junction: CLIP2.000244_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000244
Chromosome:chromosome 16
Location:5863928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679600 (1 of 1) K11092 - U2 small nuclear ribonucleoprotein A' (SNRPA1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCGCGCGCCCGGACGGTTGGTACCCGCGGCACCGACCCCTTCCCTCC
Internal bar code:ACACATGGTTCGAGGTTGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTGAAGTACGTGGCGA
Suggested primer 2:GCGCTTTCTCTTTAGCTCGC