Insertion junction: CLIP2.000247_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000247
Chromosome:chromosome 3
Location:5897575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188700 PLP6,PLAP6 Plastid lipid associated protein 6; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGAGTACATCAGCCGCCAGTCGCCCTGCACCAGGTCTAGGTCGCTAGT
Internal bar code:AGACGTGTATAACCACTCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3415
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCACTCGCTCTTCCAAC
Suggested primer 2:TGTTCCTTCTTGGGTCGACG