Insertion junction: CLIP2.000251_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000251
Chromosome:chromosome 11
Location:318603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467568 (1 of 1) K06276 - 3-phosphoinositide dependent protein kinase-1 (PDPK1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCAGCAGCAGCCAAGTTTGGCAGGGAGTGGTGGGGCTTCCGAGCAGC
Internal bar code:AAACGATGGCTTCTCGAGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTACACACACACCCTCC
Suggested primer 2:AGGATCCCCACCATCATCCA