Insertion junction: CLIP2.000254_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000254
Chromosome:chromosome 10
Location:2749720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438100 PGP2 (1 of 3) 3.1.3.18 - Phosphoglycolate phosphatase; Phosphoglycolate phosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCACTTCCGCTCGACAGGGCACTACCACGCCCTCACATGATGGCGCAG
Internal bar code:TATGAAAAACTACACGTAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4226
LEAP-Seq percent confirming:90.5263
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATCAGAGATGCAGCGCT
Suggested primer 2:CCCCAGTTTGCCTTTGTTCG