Insertion junction: CLIP2.000254_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000254
Chromosome:chromosome 10
Location:2749742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438100 PGP2 (1 of 3) 3.1.3.18 - Phosphoglycolate phosphatase; Phosphoglycolate phosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCATGCGGTTACGAGACGGCGTGCGAGGAGGCAGCCCAGGCGAGTGTA
Internal bar code:TATGAAAAACTACACGTAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGTTTGCCTTTGTTCG
Suggested primer 2:GAGATCAGAGATGCAGCGCT