Insertion junction: CLIP2.000266_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000266
Chromosome:chromosome 10
Location:2481476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435800 CSP41b,CSP41B,SNE11,RAP38 Chloroplast stem-loop-binding protein 41b; (1 of 1) PTHR10366:SF289 - CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA B, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTGGAGGCTGAAGTCTCAAACGAAGGTCTGGGCGTGCATACGGCCGT
Internal bar code:TGTAATGACATACTTGTCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1807
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCTGCTGGCATTGCTGA
Suggested primer 2:GCTGCGTTATTCCGTATCGC