Insertion junction: CLIP2.000268_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000268
Chromosome:chromosome 11
Location:315792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467568 (1 of 1) K06276 - 3-phosphoinositide dependent protein kinase-1 (PDPK1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCGTAGCCGCCGTCGCTGCCCGGCGCTCCCGGCACCCGCGGCGGCAG
Internal bar code:TGATGTAGTCTCCAGTAACCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCTTACAATCCCACCC
Suggested primer 2:AGCCCAGATGTATAGCACGC