Insertion junction: CLIP2.000272_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000272
Chromosome:chromosome 16
Location:2434080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660000 CMT1A,CPLD63 (1 of 2) PTHR12608:SF7 - GDT1-LIKE PROTEIN 2, CHLOROPLASTIC; Mn transport into chloroplast intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGACCCGCATGTAGCCGCTTCACGTCCCCGCTACGTAGTACGCCCAC
Internal bar code:GTACGTTTCCACGGTGTAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:26.8293
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCTGCTACCCCATTCCT
Suggested primer 2:GTGGATGTCCTTCTTCGGCA