Insertion junction: CLIP2.000276_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000276
Chromosome:chromosome 8
Location:4349321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384750 AMYA3,AMA3 Alpha-amylase 3; (1 of 3) K01176 - alpha-amylase (E3.2.1.1, amyA, malS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCAAGCCCCTGAAATGCATTACTGCAGTAGTAAATAGCAGGTACTCA
Internal bar code:TCTCCGCGGGCTCTATAGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1900
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCTGCCAAGGTGAGAGA
Suggested primer 2:TGCTCATCCCCAATCCCCTA