Insertion junction: CLIP2.000279_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000279
Chromosome:chromosome 16
Location:1059530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649433 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGGCGTCACACACCGACCACAGGCGGCCAAGCAAGGTTTGCCAGACC
Internal bar code:ATTGGTCTTACCTCTGTGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2918
LEAP-Seq percent confirming:97.1591
LEAP-Seq n confirming:171
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:176

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAGGCACGACTGAAGGT
Suggested primer 2:GGAGTGCCGACAAGAGTTCA