Insertion junction: CLIP2.000283_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000283
Chromosome:chromosome 12
Location:3338848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498550 MPM1,CHLM1,CHLM Mg protoporphyrin IX S-adenosyl methionine O-methyl transferase; (1 of 1) K03428 - magnesium-protoporphyrin O-methyltransferase (E2.1.1.11, chlM, bchM) 3'UTR
Cre12.g498600 EEF1,EEF1A1 (1 of 3) K03231 - elongation factor 1-alpha (EEF1A); Eukaryotic translation elongation factor 1 alpha 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACCCTAGCAGCGCCCACGCCCATGCCCTCATACCCGGCCGCAGCGCC
Internal bar code:TGCAATACCCTGCGGCGGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1553
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCTAGCCCACATGAACC
Suggested primer 2:GCGTCTCAGATCCAGTACCG