Insertion junction: CLIP2.000284_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000284
Chromosome:chromosome 7
Location:4237472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341850 TIF2,INFB,IF2,EIF2,CIF2 Chloroplast translation initiation factor 2; (1 of 1) PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCACACACCGGCGCCGTACGTGTGCCGTGCCGACACACCCTCACTGC
Internal bar code:TCCGAGCCAGTGGATGAGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1394
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGATCTTCGAGGTGCG
Suggested primer 2:ATGCCCTTCATGAACAGCGA