Insertion junction: CLIP2.000287_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000287
Chromosome:chromosome 17
Location:5664787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740261 FAP365 (1 of 96) IPR019734 - Tetratricopeptide repeat; Flagellar Associated Protein 365 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGGTGTGGCGCACCATGCCTGTGGCTGTGCGCGAGGAGCCGCTGCTG
Internal bar code:GTGTTTTTTGGATAAACTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:103
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCAACGAGCCTATCCTC
Suggested primer 2:GTTGTCGTTGTCTTGTCCGC