Insertion junction: CLIP2.000288_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000288
Chromosome:chromosome 4
Location:1432643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214200 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAATGTCAGTAGACTCCCACCCTGGTGCATCATCAATGTTGTCAACGA
Internal bar code:AGTTGGTTTACTAGGCTTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:331
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGTCTCTGGCCTACCT
Suggested primer 2:GGTACAGGACAGGAAAGGGC