Insertion junction: CLIP2.000288_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000288
Chromosome:chromosome 4
Location:1432645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214200 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGCTGAATGCCTCCAGCGCAGGCCGACCTGACCGTGCTAGGGCTGGC
Internal bar code:AGTTGGTTTACTAGGCTTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1203
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACAGGACAGGAAAGGGC
Suggested primer 2:CAGGAGTCTCTGGCCTACCT