Insertion junction: CLIP2.000290_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000290
Chromosome:chromosome 14
Location:1479016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617450 HSP22E Heat shock protein 22E; (1 of 4) PTHR11527//PTHR11527:SF128 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGATGGCGTGAGCGCCGGCTGGCGCGGCGGTCTTGCGGCGGGCAGA
Internal bar code:GCTTTGCTCCGCAGGACATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:423
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGAAGCGACTGACTTCA
Suggested primer 2:GTGGGGGAAAGAAGGGAAGG