Insertion junction: CLIP2.000295_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000295
Chromosome:chromosome 2
Location:840966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078831 (1 of 1) IPR002059//IPR012340 - Cold-shock protein, DNA-binding // Nucleic acid-binding, OB-fold 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCTTACCGCCTGCCTCCTGAAACCTGCGCCTTCCTACATTCGACTTC
Internal bar code:CTCGTCACAAACATAATTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1881
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCCCCCTTCACCTAAAG
Suggested primer 2:GGGTAATAGATGACGGCGCA