Insertion junction: CLIP2.000296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000296
Chromosome:chromosome 16
Location:1059194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649433 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGAGGCCCGACACGAGAGAAGATATACACAGGGCCCTGTGACGACGG
Internal bar code:CTCATTGTGTACGCGTATCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGAATGGAGGTAGTCGC
Suggested primer 2:AAATTGTCACGCTTTGCCCC