Insertion junction: CLIP2.000297_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000297
Chromosome:chromosome 2
Location:1529011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084350 CGLD1,PAM71 (1 of 1) PTHR12608:SF6 - GDT1-LIKE PROTEIN 1, CHLOROPLASTIC; Mn transport across thylakoid membrane 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGCCTGTTCCGGGGTTAGGTGTCCAGGCGTTACACGTGCACGTGCAA
Internal bar code:ACAACAGCGGCTATCCATCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACAAGTCCTTCCTCGCA
Suggested primer 2:CTGGTCTGCCGTGTGTTTTG