Insertion junction: CLIP2.000298_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000298
Chromosome:chromosome 1
Location:2831808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017550 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAACGCGCTGCAGACGCTGCCTGCCTGCGTGATGCAGTTGTCGGGGCT
Internal bar code:TACAAGGTTGTCGAAGTTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2825
LEAP-Seq percent confirming:82.6087
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCAGTCCTCCTCTCCGTC
Suggested primer 2:CGTAATTGTACAGCCGTGCG