Insertion junction: CLIP2.000311_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000311
Chromosome:chromosome 3
Location:2324074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGGTCCACAGACCAAACGTGCCCCTCGTTCCACTGAAGCGCTACCGC
Internal bar code:TAGGTCGGCTTGCACCCCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3789
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAAAGTCACCGTCAGGAC
Suggested primer 2:CTGTTCCTTCGCCTGTTCCT