Insertion junction: CLIP2.000314_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000314
Chromosome:chromosome 16
Location:3256468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666050 CPLD49,SCD1 (1 of 4) PF03435 - Saccharopine dehydrogenase NADP binding domain (Sacchrp_dh_NADP); Cytochrome b6f biogenesis protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTATTGCTGGGCTCTCACCCCTCGGCAAAGGGCGTGTCATCGCACACG
Internal bar code:CGTGATGTGGCGGTTTGAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3757
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCACTCTGCTCAAGGAAT
Suggested primer 2:CCGCCGTGTAGTAGCTGTAG