Insertion junction: CLIP2.000316_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000316
Chromosome:chromosome 13
Location:1595825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573200 3'UTR
Cre13.g573250 (1 of 7) 2.8.1.1 - Thiosulfate sulfurtransferase / Thiosulfate thiotransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTTGCAAGCATTACAAACGCTCGGTCTGCTCTTGACACTCATCCTCG
Internal bar code:TAATCGAATAGTAGCTTACCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4512
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCTCACTGCCCTTTCCT
Suggested primer 2:GTGTGACCGTGTTTGACAGC