Insertion junction: CLIP2.000325_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000325
Chromosome:chromosome 16
Location:1061870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649433 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCGTGCGTGCCCAGCCAGACCCTGCGCACACGCGTGTATGTGTGTGT
Internal bar code:GAGATAAGCATACAAAGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1376
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGCGCTTGCAATGATT
Suggested primer 2:ATAGCACGAGTTGTTGGCCA