Insertion junction: CLIP2.000329_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000329
Chromosome:chromosome 7
Location:2877043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332300 GWD2,1 Alpha-glucan water dikinase 2; (1 of 3) 2.7.9.4 - Alpha-glucan, water dikinase / Starch-related R1 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATTGAGACTATTTACCCGCCCCGCCCCGCCCCGCCCCGACCTGTCG
Internal bar code:CACACTAGACCTATATGTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1217
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCCCGTATTGTCTACCGT
Suggested primer 2:AGGGAGCGGGTAGACAAGAT